CDS

Accession Number TCMCG016C04609
gbkey CDS
Protein Id OMO96266.1
Location join(1353..1557,1664..1813,2315..2493,2559..2734,2862..3072,3933..4085,5919..6324,6409..7093,7182..7367,7531..7546)
Organism Corchorus capsularis
locus_tag CCACVL1_05016

Protein

Length 788aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01007478.1
Definition RNA 3'-terminal phosphate cyclase [Corchorus capsularis]
Locus_tag CCACVL1_05016

EGGNOG-MAPPER Annotation

COG_category A
Description RNA 3-terminal phosphate cyclase-like protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K11108        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03008        [VIEW IN KEGG]
map03008        [VIEW IN KEGG]
GOs GO:0000469        [VIEW IN EMBL-EBI]
GO:0000478        [VIEW IN EMBL-EBI]
GO:0000479        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004518        [VIEW IN EMBL-EBI]
GO:0004519        [VIEW IN EMBL-EBI]
GO:0004521        [VIEW IN EMBL-EBI]
GO:0004540        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0090501        [VIEW IN EMBL-EBI]
GO:0090502        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGGAAAATAACGTATAAGAAGCTAAAGGGGAGCCAAAACATGAGGCAGAGGCTACTGTTAGCAACACTAAATTCAACGCCAATTCTCATAGAAGACATCCATGCCGACGAAACCTTACCGGGTCTCCGGCCACACGAGATTTCATTCCTCCGTCTTCTTGAAAAGCTAACCGATGACTGTCACATTGAAATAAATGAAACTGGTACCAAATTGAAGTACAAGCCTGGGATTATCGTGGGAGGGAGTAGTCTGGTGCACGATTGCGGTGTTAGTAGAGCAATTGGGTACTTTTTGGAGCCTTTGATCGTGCTTGGATTGTTTGCTAGGAAACCCCTTTTCATTATCCTCAAAGGGATTACAAATGATTCAAAGGACCCTTCTGTTGATACTTTCCGTAAAGCCACCTTACCAATGTTGAAGCGTTTTGGGGTTCCTCCAGAAGGGCTGAAGATAGAAATCAAGAGACGTGGAGTTCCACCTCATGGTGGTGGTGAAGTTCATCTGGCTGTTCCTACCATTCAGCAACTAACTGCAACCATTTGGACTGATGAAGGAATGGTTAAGAGGATTAGAGGGATAGCTTTCACTTCCAGAGTTAGCGTTCAGCTTGGAAACGAGATGATTTACACTGCTCGTGGAATTTTTAATAAATTGCTTCCAGATGTTTATATTGATAGTGATTACAGATTTCGCGAAGAAGCTGGAAGCTCACCAGGTTATGGAATTTCACTAGTTGCCGAAACTACTTCTGGTTGCTTCATCTCTGCTGATACTACAATTTCTTATCCACGAGGGGAAGAAGCAGATATTGAAGATGAGAAGGAAGAGCTGATGCCTGCAGCTGATGTTGGGGAGCAAATGGCTTCCATTCTTCTCGAAGAGATTGAGAAAGGTGGAGTAGTGGATTCATCTCACCAGGGTTTGTTATTTCTTCTTTGTGCGTTATGTCCAAAAGATGTGTCAAAGGTTCGTGTGGGGAAGCTCTCACCCTATGGAATCGAAACACTAAGACACATAAAAGATTTTCTGGATGTTCAATTCGTGATAAAGCCAGATCCATCTACAGGTACGTACTTGCAGCTAAGAAGATACCTCATTGTCTTAGACGATGTTTGGAACATTCGATTATGGCAGGAGATTAGCATTGTATTTCCGGAAGGTTTGCGTGGGAGCAGGGTCATGGTTACAACTCGATACGAAGATGCAGTTCGTTCCCAATATGTCTACCGAATTCAGCCATTGAAAGAAGATGAGGCTTGGCAACTCTTTTGTAAGAGAGCATTTCCAGATGATGTTGGTAGATGGTGTCAAACATATCTTGATTCACTGGCAAGGAATCTGGTTGAAAAATGTGAAGGCCTGCCATTAACAATAGTGACTTTAGGCGGTTTGATGTCATCTAAGAAGTCAATTGCAGAATGGAAGAGAGTGCATGACAACTTGAATTGGGAGCTAAGCAACAACACTGCACTGGAAAAAGATTATATGATTCATCGGAAAAAACTTGTAAGACTTTGGATGGCAGAGGGCTTTTTAAAAGCGGATAACGATGCAACACCAGAAGCGGTTGGTGAGAGCTACCTAATGGAACTAATTTACCGAAGCTTGCTTGAAGTCAAAGGAAGGAATACTTCCGGAAGGCCCAAGGTAATTAAAATGCATGATGTTTTGCTGGAGATTTTACTTCCAATATCAAATGAAGAAAAATTTGTTGCTGTATCTGATGGGGGAAAAGAAGTCAAAGAGAATGGAATTCATTGTTGTTCAGTGATAGTGAAGGGTGAAGGTGTACAACCAGGTATGTCACAACTTCATTCTCTTTTTGTTTTTGTTGTTGGCGATGTTTCCATATCTTGGTTCTACAAATTGCAATATGGTTTTAAGTTGTTAAGAGTACTGGATTTGGAAGATGTTCCAATCCATGTACTCCCAACGGAAATTGGAAAATTTTTCCATTTGAGGTATTTGAACCTAACAAGAACTCAAGTGAATGTGCTTCCGAAATCAATAGGAAAACTTGTTAACTTGCAGACCTTGGTGTTTAAGGGGGCCAATATTGAGGAGCTTTCATTTGAAATTGTGAAGCTACAAAATTTGCGACATCTATCTGGTTTTGTTTTCCATACTTTGGAAGGTCCCACGGCATACGTGTGCCACCAAATAACTCTTGCTCTTGGCAATCTTAAGGAAGCTGATGAGGAACACTTGTGCTCTACCATTGGAGGGATGAAAGACCTTCAAAACTTGCGCTTGGTTACAGGTGCACGTTCTGGACGTTTGAAGCTTGATGCACTTTTATCAGTTCCTCCTTATCTCGAGAAGCTTTTCCTAAATGGTGAAATGGAAAGGGTTCCAAAAGCTTAA
Protein:  
MGKITYKKLKGSQNMRQRLLLATLNSTPILIEDIHADETLPGLRPHEISFLRLLEKLTDDCHIEINETGTKLKYKPGIIVGGSSLVHDCGVSRAIGYFLEPLIVLGLFARKPLFIILKGITNDSKDPSVDTFRKATLPMLKRFGVPPEGLKIEIKRRGVPPHGGGEVHLAVPTIQQLTATIWTDEGMVKRIRGIAFTSRVSVQLGNEMIYTARGIFNKLLPDVYIDSDYRFREEAGSSPGYGISLVAETTSGCFISADTTISYPRGEEADIEDEKEELMPAADVGEQMASILLEEIEKGGVVDSSHQGLLFLLCALCPKDVSKVRVGKLSPYGIETLRHIKDFLDVQFVIKPDPSTGTYLQLRRYLIVLDDVWNIRLWQEISIVFPEGLRGSRVMVTTRYEDAVRSQYVYRIQPLKEDEAWQLFCKRAFPDDVGRWCQTYLDSLARNLVEKCEGLPLTIVTLGGLMSSKKSIAEWKRVHDNLNWELSNNTALEKDYMIHRKKLVRLWMAEGFLKADNDATPEAVGESYLMELIYRSLLEVKGRNTSGRPKVIKMHDVLLEILLPISNEEKFVAVSDGGKEVKENGIHCCSVIVKGEGVQPGMSQLHSLFVFVVGDVSISWFYKLQYGFKLLRVLDLEDVPIHVLPTEIGKFFHLRYLNLTRTQVNVLPKSIGKLVNLQTLVFKGANIEELSFEIVKLQNLRHLSGFVFHTLEGPTAYVCHQITLALGNLKEADEEHLCSTIGGMKDLQNLRLVTGARSGRLKLDALLSVPPYLEKLFLNGEMERVPKA